BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A05SP1|AL426622
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1534 0.0
>3x_Contig1766
Length = 23951
Score = 1534 bits (774), Expect = 0.0
Identities = 781/782 (99%), Gaps = 1/782 (0%)
Strand = Plus / Minus
Query: 1 ttctaccgtntcaattcattaccgtcatcatcgtaatatttttcttcatccaacatcagt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15499 ttctaccgt-tcaattcattaccgtcatcatcgtaatatttttcttcatccaacatcagt 15441
Query: 61 tcgttggaatgagattttctatggccatcggtgttgtttctaccgacagtattatttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15440 tcgttggaatgagattttctatggccatcggtgttgtttctaccgacagtattatttctt 15381
Query: 121 gttggcgccaacactgatggttcatcgatacctgattccggagattccgtcacgtaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15380 gttggcgccaacactgatggttcatcgatacctgattccggagattccgtcacgtaatcg 15321
Query: 181 tccgtttgtttacccatgaatgctttccaccatttagacactttaccagaagtgtatgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15320 tccgtttgtttacccatgaatgctttccaccatttagacactttaccagaagtgtatgcg 15261
Query: 241 gtcaccactttaccctctgagtttaagaagttcgttctctttggtttgatgcagaaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15260 gtcaccactttaccctctgagtttaagaagttcgttctctttggtttgatgcagaaaatg 15201
Query: 301 tagatcaatgccaataatacaagcaagatcgggacacccaaccctacaacaacaccgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15200 tagatcaatgccaataatacaagcaagatcgggacacccaaccctacaacaacaccgatc 15141
Query: 361 acaatccttttatttttgtcgcttagtcccgtgtgttggccttctctgctgtcgggatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15140 acaatccttttatttttgtcgcttagtcccgtgtgttggccttctctgctgtcgggatcg 15081
Query: 421 ctggtactagtaggtgtgaaagtaactgtagtgtacctatcgctcaaaatcgtgacaccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15080 ctggtactagtaggtgtgaaagtaactgtagtgtacctatcgctcaaaatcgtgacaccg 15021
Query: 481 ttgatcaccgaagtgatggtggtcggcggatgtgtggtggtcggatcagacgatgattcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15020 ttgatcaccgaagtgatggtggtcggcggatgtgtggtggtcggatcagacgatgattcc 14961
Query: 541 actgatgtagaagttgtctcctcttcagatgatgttgtggtttcatccagatcgctagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14960 actgatgtagaagttgtctcctcttcagatgatgttgtggtttcatccagatcgctagaa 14901
Query: 601 gtgctggtagaagagcttgtgcttgaactggtagatgatgatgatgtggaagactcggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14900 gtgctggtagaagagcttgtgcttgaactggtagatgatgatgatgtggaagactcggat 14841
Query: 661 gaagaactgctactactgctagtagtggtgttagaaggaagctcagaactagatgagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14840 gaagaactgctactactgctagtagtggtgttagaaggaagctcagaactagatgagata 14781
Query: 721 tccgttgaaatgaaagacgtcgacacttctgacatcgaagtctcttctggggcttcagac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14780 tccgttgaaatgaaagacgtcgacacttctgacatcgaagtctcttctggggcttcagac 14721
Query: 781 ga 782
||
Sbjct: 14720 ga 14719
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5730
Number of Sequences: 1807
Number of extensions: 5730
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)